Category Archive 'Science'
20 Feb 2009

Finding Bin Laden by Biogeographic Analysis

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Remember the “How to Catch a Lion in the Sahara Desert” science jokes which often used to be found on departmental bulletin back when my generation was young?

Examples:

The Hilbert (axiomatic) method

We place a locked cage onto a given point in the desert. After that we introduce the following logical system:

Axiom 1: The set of lions in the Sahara is not empty.
Axiom 2: If there exists a lion in the Sahara, then there exists a lion in the cage.
Procedure: If P is a theorem, and if the following is holds: “P implies Q”, then Q is a theorem.
Theorem 1: There exists a lion in the cage.

The geometrical inversion method

We place a spherical cage in the desert, enter it and lock it from inside. We then perform an inversion with respect to the cage. Then the lion is inside the cage, and we are outside.

The projective geometry method

Without loss of generality, we can view the desert as a plane surface. We project the surface onto a line and afterwards the line onto an interiour point of the cage. Thereby the lion is mapped onto that same point.

The Bolzano-Weierstraß method

Divide the desert by a line running from north to south. The lion is then either in the eastern or in the western part. Let’s assume it is in the eastern part. Divide this part by a line running from east to west. The lion is either in the northern or in the southern part. Let’s assume it is in the northern part. We can continue this process arbitrarily and thereby constructing with each step an increasingly narrow fence around the selected area. The diameter of the chosen partitions converges to zero so that the lion is caged into a fence of arbitrarily small diameter.

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This type of scientific approach to real world tasks has not completely gone out of style, it seems. The LA Times reports that Thomas W. Gillespie and John A. Agnew, two UCLA professors of geography, et alia, in an article in MIT’s International Review, have undertaken to pin down Osama bin Laden’s current hideout, using biogeographic theory. They may be wrong, but I think we should bomb the buildings they’ve identified just for luck.

While U.S. intelligence officials have spent more than seven years searching fruitlessly for Osama bin Laden, UCLA geographers say they have a good idea of where the terrorist leader was at the end of 2001 — and perhaps where he has been in the years since.

In a new study published online today by the MIT International Review, the geographers report that simple facts, publicly available satellite imagery and fundamental principles of geography place the mastermind behind the Sept. 11 attacks against the U.S. in one of three buildings in the northwest Pakistan town of Parachinar, in the Kurram tribal region near the border with Afghanistan

The researchers advocate that the U.S. investigate — but not bomb — the three buildings. …

The UCLA findings rely on two principles used in geography to predict the distribution of wildlife, primarily for the purposes of designing approaches to conservation. The first, known as distance-decay theory, holds that as one travels farther away from a precise location with a specific composition of species — or, in this case, a specific composition of cultural and physical factors —the probability of finding spots with that same specific composition decreases exponentially. The second, island biogeographic theory, holds that large and close islands have larger immigration rates and will support more species than smaller, more isolated islands.

Inspired by distance-decay theory, the seven-member team started by drawing concentric circles around Tora Bora on a satellite map of the area at a distance of 10 kilometers — or 6.1 miles — apart.

“The farther bin Laden moves from his last reported location into the more secular parts of Pakistan or into India, the greater the probability that he will be in an area with a different cultural composition, thereby increasing the probability of his being captured or eliminated,” Gillespie said.

Then, informed by island biogeographic theory, the researchers scoured the rings for “city islands” — or distinctly separate settlements of considerable size.

“Island biology theory predicts that he would find his way to the largest but least isolated city of that area,” said Gillespie, an authority on measuring and modeling biodiversity on Earth from space. “If you get stuck on an island, you would want it to be Hawaii rather than one with a single palm tree. It’s a matter of resources.”

The approach netted 26 cities within a 12.4-mile radius of Tora Bora on imagery from Landsat Enhanced Thematic Mapper Plus (ETM+), a global archive of satellite photos managed by NASA and the U.S. Geological Survey. With a 2.7-square-mile footprint, Parachinar turned out to be the largest and fourth-least isolated city, the team determined.

“Based on bin Laden’s last known location in Tora Bora, we estimate that he must have traveled 1.9 miles over a 13,000-foot-high pass into Kurram and then headed for the largest city, which turns out to be Parachinar,” said Agnew, who is the current president of the Association of American Geographers, the field’s leading scholarly organization.

The researchers ruled out cities on the Afghanistan side of the border because the country was occupied at the time by U.S. and international forces and has been particularly unstable ever since.

“The Pakistan side of the border is much better for hiding because of its ambiguous political status within the country and the formal absence of U.S. or NATO troops,” Agnew said.

Faced with the prospect of picking from more than 1,000 structures clearly portrayed in the satellite imagery of Parachinar, the team decided to come up with a short list of the criteria that bin Laden would need for housing, based on well-known information about him, including his height (between 6’4″ and 6’6″, depending on the source), his medical condition (apparently in need of regular dialysis and, therefore, electricity to run the machine) and several basic assumptions, such as a need for security, protection, privacy and overhead cover to shield him from being spotted by planes, helicopters and satellites.

So they looked for buildings that could house someone taller than 6’4″ and were surrounded by walls more than 9 feet tall (both as judged by mid-afternoon shadows depicted on the satellite imagery), and that had more than three rooms, space separating them from nearby structures, electricity and a thick tree canopy.

Only three structures fit the criteria. The buildings also appeared to be the best fortified and among the largest in Parachinar. Two are clearly residences, the study states. The third may be a prison. But whatever the third structure is, it has “one of the best maintained gardens in all of Parachinar,” the study says.

While the three structures meet all six of the criteria that the researchers believe would be required for lodging bin Laden, an additional 16 structures in Parachinar appear to meet five of the six criteria. If bin Laden is not in the first three structures, the U.S. military should investigate these other buildings, the study urges.

21 Jan 2009

More Than DNA to It

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Scientific evidence has been found that currently unknown forms of stored data beyond DNA may function in the transmission of inherited traits.

Science Daily:

Scientists at the Centre for Addiction and Mental Health (CAMH) have detected evidence that DNA may not be the only carrier of heritable information; a secondary molecular mechanism called epigenetics may also account for some inherited traits and diseases. These findings challenge the fundamental principles of genetics and inheritance, and potentially provide a new insight into the primary causes of human diseases.

12 Jan 2009

Blue Eyes Inherited From Single Ancestor

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Everyone with blue eyes shares a common matrilineal ancestor who lived between 6000 and 10000 years ago.

LiveScience

19 Dec 2008

Working Model of Antikythera Mechanism

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Found in 1900 by sponge divers off the Greek island of Antikythera on a shipwreck dated to 87 B.C.


Detail of new working model

Michael Wright, former curator of London’s Science Museum has successfully reconstructed the mysterious Antikythera Mechanism, the world’s first known computer.

Wired:

A dictionary-size assemblage of 37 interlocking dials crafted with the precision and complexity of a 19th-century Swiss clock, the Antikythera mechanism was used for modeling and predicting the movements of the heavenly bodies as well as the dates and locations of upcoming Olympic games.

The original 81 shards of the Antikythera were recovered from under the sea (near the Greek island of Antikythera) in 1902, rusted and clumped together in a nearly indecipherable mass. Scientists dated it to 150 B.C. Such craftsmanship wouldn’t be seen for another 1,000 years — but its purpose was a mystery for decades.

Many scientists have worked since the 1950s to piece together the story, with the help of some very sophisticated imaging technology in recent years, including X-ray and gamma-ray imaging and 3-D computer modeling.

Now, though, it has been rebuilt. As is almost always the way with these things, it was an amateur who cracked it. Michael Wright, a former curator at the Science Museum in London, has built a replica of the Antikythera, which works perfectly.

2:43 video

New Scientist 12 December 2008 article

Earlier Antikythera Mechanism posting

11 Dec 2008

650 Scientists Reject Anthropogenic Global Warming

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US Senate Environmental and Pubic Works Committee:

The UN global warming conference currently underway in Poland is about to face a serious challenge from over 650 dissenting scientists from around the globe who are criticizing the climate claims made by the UN IPCC and former Vice President Al Gore. Set for release this week, a newly updated U.S. Senate Minority Report features the dissenting voices of over 650 international scientists, many current and former UN IPCC scientists, who have now turned against the UN. The report has added about 250 scientists (and growing) in 2008 to the over 400 scientists who spoke out in 2007. The over 650 dissenting scientists are more than 12 times the number of UN scientists (52) who authored the media hyped IPCC 2007 Summary for Policymakers.

Read the whole thing.

15 Nov 2008

The Realities of Supposedly Human-Caused Climate Change

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Robert Carter, in Quadrant Magazine, provides an excellent tour d’horizon of the scientific realities and politics of alleged Anthropogenic Climate Change.

Climate change knows three realities: science reality, which is what working scientists deal with every day; virtual reality, which is the wholly imaginary world inside computer climate models; and public reality, which is the socio-political system within which politicians, business people and the general citizenry work.

The science reality is that climate is a complex, dynamic, natural system that no one wholly comprehends, though many scientists understand different small parts. So far, science provides no unambiguous evidence that dangerous or even measurable human-caused global warming is occurring.

The virtual reality is that computer models predict future climate according to the assumptions that are programmed into them. There is no established Theory of Climate, and therefore the potential output of all realistic computer general circulation models (GCMs) encompasses a range of both future warmings and coolings, the outcome depending upon the way in which they are constructed. Different results can be produced at will simply by adjusting such poorly known parameters as the effects of cloud cover.

The public reality in 2008 is that, driven by strong environmental lobby groups and evangelistic scientists and journalists, there is a widespread but erroneous belief in our society that dangerous global warming is occurring and that it has human causation.

Read the whole thing.

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Hat tip to Bird Dog.

31 Oct 2008

Methane Levels Contradict Global Warming Theory

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TG Daily:

Scientists at MIT have recorded a nearly simultaneous world-wide increase in methane levels. This is the first increase in ten years, and what baffles science is that this data contradicts theories stating man is the primary source of increase for this greenhouse gas. It takes about one full year for gases generated in the highly industrial northern hemisphere to cycle through and reach the southern hemisphere. However, since all worldwide levels rose simultaneously throughout the same year, it is now believed this may be part of a natural cycle in mother nature – and not the direct result of man’s contributions.

The two lead authors of a paper published in this week’s Geophysical Review Letters, Matthew Rigby and Ronald Prinn, the TEPCO Professor of Atmospheric Chemistry in MIT’s Department of Earth, Atmospheric and Planetary Science, state that as a result of the increase, several million tons of new methane is present in the atmosphere.

19 Aug 2008

European Genetics and Geography

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The New York Times summarizes an article on European Genetics from Current Biology which arrives the conclusion that it could very likely be possible to identify the nationality of Europeans by genetic testing.

Europe has been colonized three times in the distant past, always from the south. Some 45,000 years ago the first modern humans entered Europe from the south. The glaciers returned around 20,000 years ago and the second colonization occurred about 17,000 years ago by people returning from southern refuges. The third invasion was that of farmers bringing the new agricultural technology from the Near East around 10,000 years ago.

The pattern of genetic differences among present day Europeans probably reflects the impact of these three ancient migrations, Dr. Kayser said.

The map also identifies the existence of two genetic barriers within Europe. One is between the Finns (light blue, upper right) and other Europeans. It arose because the Finnish population was at one time very small and then expanded, bearing the atypical genetics of its few founders.

The other is between Italians (yellow, bottom center) and the rest. This may reflect the role of the Alps in impeding free flow of people between Italy and the rest of Europe.

Correlation between Genetic and Geographic Structure in Europe article

08 Aug 2008

Neanderthal Mitochondrial DNA Sequenced

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Science News:

Results show modern humans, Neandertals diverged 660,000 years ago

An international consortium of researchers reports in the Aug. 8 Cell that for the first time the complete sequence of mitochondrial DNA from a Neandertal has been deciphered. Comparison of the Neandertal sequence with mitochondrial sequences from modern humans confirms that the two groups belong to different branches of humankind’s family tree, diverging 660,000 years ago.

That date is not statistically different from previous estimates of the split between humans and Neandertals, says Erik Trinkaus, a paleoanthropologist at Washington University in St. Louis. The sequence also doesn’t reveal what happened to drive Neandertals to extinction, but it does clear up some discrepancies in earlier studies. …

At 16,565 bases long, the new sequence is the largest stretch of Neandertal DNA ever examined. The DNA was isolated from a 38,000-year-old bone found in a cave in Croatia.

“It’s a nice accomplishment and the next important step toward completing the Neandertal genome,” says Stephan Schuster of Pennsylvania State University in University Park. Schuster is part of a group that is sequencing the genomes of the mammoth and other extinct animals, but was not involved in the current study. “It’s a nice landmark on the way to saying what makes modern humans so special.”

In order to know exactly how modern humans and Neandertals differ, scientists will need to examine DNA from the Neandertal’s entire genome. The sequence reported in the new study was generated as part of a project to decode Neandertal DNA, but it contains information only about DNA from mitochondria.

Mitochondria are organelles that generate energy for a cell. Inside each mitochondrion is a circular piece of DNA that contains genes encoding some of the key proteins responsible for power generation. Mitochondria are passed down from mothers to their children. Scientists use variations in mitochondrial DNA as a molecular clock to tell how fast species are evolving.

Scientists have previously examined a short piece of Neandertal mitochondrial DNA known as the hypervariable region, but this new complete sequence helps clear up some ambiguities from studies comparing Neandertals and humans, says John Hawks, a biological anthropologist from the University of Wisconsin–Madison.

Some modern humans have several changes in the hypervariable region that made it seem as if Neandertals are more closely related to modern humans than humans are to each other.

“Comparing the complete mitochondrial DNA genomes of a Neandertal and many recent humans presents a very different picture,” Hawks says. “Humans are all more similar to each other, than any human is to a Neandertal. And in fact the Neandertal sequence is three or more times as different, on average, from us as we are from each other. This change from the earlier picture is a purely statistical one, but it makes a clearer picture.”

Human and Neandertal mitochondrial DNAs differ at 206 positions out of the 16,565 examined, while modern humans differ at only about 100 positions when compared with each other.

04 Aug 2008

Royal Navy Sinking Junk Science

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The Telegraph reports that Britain’s historic Royal Navy, which so long successfully defended the island nation from Continental invasion, is proving centuries later also in retrospect an effective defense against junk science.

Scientists have uncovered a treasure trove of meteorological information contained in the detailed logs kept by those on board the vessels that established Britain’s great seafaring tradition including those on Nelsons’ Victory and Cook’s Endeavour.

Every Royal Naval ship kept a detailed record of climate including air pressure, wind strength, air and sea temperature and major meteorological disturbances.

A group of academics and Met Office scientists has unearthed the records dating from the 1600s and examined more than 6,000 logs, which have provided one of the world’s best sources for long-term weather data.

Their studies have raised questions about modern climate change theories. A paper by Dennis Wheeler, a geographer based at Sunderland University, recounts an increasing number of summer storms over Britain in the late 17th century.

Many scientists believe that storms are caused by global warming, but these were came during the so-called Little Ice Age that affected Europe from about 1600 to 1850.

The records also suggest that Europe saw a spell of rapid warming, similar to that experienced today, during the 1730s that must have been caused naturally.


Take my drum to England, hang et by the shore,
Strike et when your powder’s runnin’ low;
If the Dons sight Devon, I’ll quit the port o’ Heaven,
An’ drum them up the Channel as we drummed them long ago.

–Sir Francis Drake, according to Henry Newbolt.

29 Jun 2008

Atmospheric Greenhouse Effect Falsified By Physics

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We’ve been hearing a great deal from our liberal friends about “settled science.” Reading this paper, I feel compelled to agree. The science is settled: an atmospheric greenhouse effect is incompatible with the established facts of theoretical physics and thermodynamic engineering.

ABSTRACT

The atmospheric greenhouse effect, an idea that authors trace back to the traditional works of Fourier 1824, Tyndall 1861, and Arrhenius 1896, and which is still supported in global climatology, essentially describes a fictitious mechanism, in which a planetary atmosphere acts as a heat pump driven by an environment that is radiatively interacting with but radiatively equilibrated to the atmospheric system. According to the second law of thermodynamics such a planetary machine can never exist. Nevertheless, in almost all texts of global climatology and in a widespread secondary literature it is taken for granted that such mechanism is real and stands on a firm scientific foundation. In this paper the popular conjecture is analyzed and the underlying physical principles are clarified. By showing that (a) there are no common physical laws between the warming phenomenon in glass houses and the fictitious atmospheric greenhouse effects, (b) there are no calculations to determine an average surface temperature of a planet, (c) the frequently mentioned difference of 33 degrees Celsius is a meaningless number calculated wrongly, (d) the formulas of cavity radiation are used inappropriately, (e) the assumption of a radiative balance is unphysical, (f) thermal conductivity and friction must not be set to zero, the atmospheric greenhouse conjecture is falsified.

PDF

The Earth is not a greenhouse. As the authors observe:

It is not the “trapped” infrared radiation, which explains the warming phenomenon in a real greenhouse, but it is the suppression of air cooling.

CONCLUSIONS:

A statistical analysis, no matter how sophisticated it is, heavily relies on underlying models and if the latter are plainly wrong then the analysis leads to nothing. One cannot detect and attribute something that does not exist for reason of principle like the CO2 greenhouse effect. There are so many unsolved and unsolvable problems in non-linearity and the climatologists believe to beat them all by working with crude approximations leading to unphysical results that have been corrected afterwards by mystic methods, flux control in the past, obscure ensemble averages over different climate institutes today, by excluding accidental global cooling results by hand, continuing the greenhouse inspired global climatologic tradition of physically meaningless averages and physically meaningless applications of mathematical statistics.

In conclusion, the derivation of statements on the CO2 induced anthropogenic global warming out of the computer simulations lies outside any science. …

The point discussed here was to answer the question, whether the supposed atmospheric effect has a physical basis. This is not the case. In summary, there is no atmospheric greenhouse effect, in particular CO2-greenhouse effect, in theoretical physics and engineering thermodynamics. Thus it is illegitimate to deduce predictions which provide a consulting solution for economics and intergovernmental policy.

Hat tip to QandO via Bird Dog.

01 May 2008

Albert Hoffmann, January 11, 1906 – April 29, 2008

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Albert Hoffman – 100 Birthday Commemorative Blotter Acid by Wes Black

The Guardian reports the sad news.

Albert Hofmann, the Swiss chemist who discovered the hallucinogenic drug LSD, has died aged 102.

Hofmann, known as the father of LSD, died yesterday at his home in Burg im Leimental, Basle, Switzerland.

His death was confirmed by Doris Stuker, a municipal clerk in the village where Hofmann lived following his retirement in 1971.

The California-based Multidisciplinary Association for Psychedelic Studies (Maps), which republished Hofmann’s book on LSD, said on its website that he had died from a heart attack.

Dieter A Hagenbach, a friend of 40 years, last spoke to Hofmann on Saturday. “He was in good spirits and enjoying the springtime,” said Hagenbach.

Born on January 11 1906, Hofmann discovered LSD – lysergic acid diethylamide, which later became the favoured drug of the 1960s counterculture – when a tiny quantity leaked on to his hand during a laboratory experiment in 1943.

He noted a “remarkable restlessness, combined with slight dizziness” that made him stop his work. “At home I lay down and sank into a not unpleasant intoxication-like condition, characterised by an extremely stimulated imagination,” Hofmann wrote in his book LSD: My Problem Child.

“In a dreamlike state, with eyes closed (I found the daylight too unpleasantly glaring), I perceived an uninterrupted stream of fantastic pictures, extraordinary shapes with intense, kaleidoscopic play of colours. After some two hours this condition faded away.”

A few days later, Hofmann intentionally took a dose of LSD and experienced the world’s first “bad trip”.

“On the way home, my condition began to assume threatening forms. Everything in my field of vision wavered and was distorted as if seen in a curved mirror,” he said.

“My surroundings had now transformed themselves in more terrifying ways. A demon had invaded me, had taken possession of my body, mind, and soul. I jumped up and screamed, trying to free myself from him, but then sank down again and lay helpless on the sofa. The substance, with which I had wanted to experiment, had vanquished me.” …

Hofmann and his scientific colleagues hoped LSD would make an important contribution to psychiatric research. The drug exaggerated inner problems and conflicts and it was hoped it might be used to treat mental illnesses such as schizophrenia.

For a time, the laboratory where he worked, Sandoz, sold LSD 25 under the name Delysid, encouraging doctors to try it themselves. It was one of the strongest drugs in medicine, with just one gram enough to drug an estimated 10,000 to 20,000 people for 12 hours.

The US government banned LSD in 1966, following stories of heavy users suffering permanent psychological damage, and other countries followed suit.

The president of Maps, Rick Doblin, said he had spoken to Hofmann on the phone recently “and he was happy and fulfilled. He’d seen the renewal of LSD psychotherapy research with his own eyes.”

“Don’t Eat that Hot Dog!” — 1960’s Anti-LSD Propaganda short

3:37 video

And he only lived to 102!

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Hat tip to Karen L. Myers.

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