Category Archive 'Science'
16 Dec 2009

In the Spectator, epidemiologist Paul Reiter debunks the “malaria spreading because of Global Warming” meme popularized by Al Gore, and explains how the repetition in print of empty assertions by small groups of activists can effectively promote complete falsehoods into established fact.
Al Gore’s film, An Inconvenient Truth, was a masterpiece. Like an elder brother to all humanity, he patiently explained the familiar litany of disasters — droughts, floods, hurricanes, sea-level rise and the rest — spiced with heartrending personal stories: his baby son’s near-fatal accident, the agony of losing a sister to lung cancer. It was a science lecture crafted by Hollywood. …
In his serious voice, Mr Gore presented a nifty animation, a band of little mosquitoes fluttering their way up the slopes of a snow-capped mountain, and he repeated the old line: Nairobi used to be ‘above the mosquito line, the limit at which mosquitoes can survive, but now…’ Those little mosquitoes kept climbing.
The truth? Nairobi means ‘the place of cool waters’ in the Masai language. The town grew up around a camp, set up in 1899 during the construction of a railway, the famous ‘Lunatic Express’. There certainly was water there — and mosquitoes. From the start, the place was plagued with malaria, so much so that a few years later doctors tried to have the whole town moved to a healthier place. By 1927, the disease had become such a plague in the ‘White Highlands’ that £40,000 (equivalent to about £350,000 today) was earmarked for malaria control. The authorities understood the root of the problem: forest clearance had created the perfect breeding places for mosquitoes. The disease was present as high as 2,500m above sea level; the mosquitoes were observed at 3,000m. And Nairobi? 1,680m.
These details are not science. They require no study. They are history. But for activists, they are an inconvenient truth, so they ignore them. Even if Mr Gore is innocent, his advisers are not. They have been spouting the same nonsense for more than a decade. As scientists, we have repeatedly challenged them in the scientific press, at meetings and in news articles, and we have been ignored.
In 2004, nine of us published an appeal in the Lancet: ‘Malaria and climate change: a call for accuracy’. Clearly, Mr Gore didn’t read it. In 2000, I protested when Scientific American published a major article loaded with the usual misrepresentations. And when I watched his animated mosquitoes, his snow-capped mountain was oddly familiar. It took a few moments to click: the images were virtually identical to those in the magazine. The author of the article, Dr Paul Epstein, features high in Gore’s credits.
Dr Epstein is a member of a small band dedicated to a cause. And their work gains legitimacy, not by scholarship, but by repetition. While they publish their work in highly regarded journals, they don’t write research papers but opinion pieces and reviews, with little or no reference to the mainstream of science. The same claims, the same names; only the order of authors change. I have counted 48 separate pieces by just eight activists. They are myth-makers. And all have been lead authors and/or contributory authors of the prestigious IPCC assessment reports.
Take their contention, for example, that as a result of climate change, tropical diseases will move to temperate regions and malaria will come to Britain. If they bothered to learn about the subject, they would know that in a period climatologists call the Little Ice Age, when Charles II held ice parties on the Thames, malaria — ‘the ague’ — was rampant in the Essex marshes, on a par even with regions in Africa today. In the 18th century, the great systematist Linnaeus wrote his doctorate on malaria in central Sweden. In 1922-23 a massive epidemic swept the Soviet Union as far north as Archangel, on the Arctic circle, killing an estimated 600,000 people. And malaria was only eliminated from the Soviet Union and large areas of Europe in the 1950s, after the advent of DDT. So it’s hardly a tropical disease. And yet when we put this information under the noses of the activists it is ignored: ours is the inconvenient truth.
13 Dec 2009


Iowahawk offers readers “a detailed how-to-guide for replicating the climate reconstruction method used by the so-called “Climategate” scientists. Not a perfect replication, but a pretty faithful facsimile that you can do on your own computer, with some of the same data they used.”
It takes 30-60 minutes, along with modest math & spreadsheet skills, he promises.
My goal was to provide interested people with a hands-on DIY example of the basic statistical methodology underlying temperature reconstruction, at least as practiced by the leading lights of “Climate Science.”
If you’ve followed all this, it should also give you the important glossary terms that should help you decipher the Climategate emails and methodology discussions. For example “instrumental data” means observed temperature; “reconstructions” are the modeled temperatures from the past; “proxy” means the tree ring, ice core, etc. predictors; “PCs” mean the principal components.
Is there anything wrong with this methodology? Not in principle. In fact there’s a lot to recommend it. There’s a strong reason to believe that high resolution proxy variables like tree rings and ice core o-18 are related to temperature. At the very least it’s a more mathematically rigorous approach than the earlier methods for climate reconstruction, which is probably why the hockey stick / AGW conclusion received a lot of endorsements from academic High Society (including the American Statistical Association).
The devil, as they say is in the details. In each of the steps there is some leeway for, shall we say, intervention. …
(If you run a few tests,)
(C)ontrary to Mann’s assertion that the hockey stick is “robust,” you’ll find that the reconstructions tend to be sensitive to the data selection. M&M found, for example, that temperature reconstructions for the 1400s were higher or lower than today, depending on whether bristlecone pine tree rings were included in the proxies.
What the leaked emails reveal, among other things, is some of that bit of principal component sausage making. But more disturbing, they reveal that the actual data going into the reconstruction model — the instrumental temperature data and the proxy variables themselves — were rife for manipulation. In the laughable euphemism of Philip Jones, “value added homogenized data.” The data I provided here was the real, value added global temperature and proxy data, because Phil told me so. Trust me!
01 Dec 2009

Meteorite of Martian origin thought to include a fossilized bacteria colony
NASA scientists are gradually becoming convinced that Mars at least used to harbor life.
The Telegraph:
A research team at Johnson Space Centre in Houston has been re-examining a meteorite that hit Antarctica 13,000 years ago, and found the most compelling evidence yet that the planet once harboured bacterial life.
The team says that microscopic crystals found in the rock are almost certainly fossilised bacteria that have many characteristics in common with bacteria found on Earth.
“The evidence supporting the possibility of past life on Mars has been slowly building up during the past decade,†said David McKay, Nasa chief scientist for exploration and astrobiology.
29 Nov 2009

Christopher Booker argues in the Telegraph that “(o)ur hopelessly compromised scientific establishment cannot be allowed to get away with a whitewash of what has become the greatest scientific scandal of our age.”
(T)he question which inevitably arises from this systematic refusal to release their data is – what is it that these scientists seem so anxious to hide? The second and most shocking revelation of the leaked documents is how they show the scientists trying to manipulate data through their tortuous computer programmes, always to point in only the one desired direction – to lower past temperatures and to “adjust” recent temperatures upwards, in order to convey the impression of an accelerated warming. This comes up so often (not least in the documents relating to computer data in the Harry Read Me file) that it becomes the most disturbing single element of the entire story. This is what Mr McIntyre caught Dr Hansen doing with his GISS temperature record last year (after which Hansen was forced to revise his record), and two further shocking examples have now come to light from Australia and New Zealand.
In each of these countries it has been possible for local scientists to compare the official temperature record with the original data on which it was supposedly based. In each case it is clear that the same trick has been played – to turn an essentially flat temperature chart into a graph which shows temperatures steadily rising. And in each case this manipulation was carried out under the influence of the CRU.
What is tragically evident from the Harry Read Me file is the picture it gives of the CRU scientists hopelessly at sea with the complex computer programmes they had devised to contort their data in the approved direction, more than once expressing their own desperation at how difficult it was to get the desired results.
The third shocking revelation of these documents is the ruthless way in which these academics have been determined to silence any expert questioning of the findings they have arrived at by such dubious methods – not just by refusing to disclose their basic data but by discrediting and freezing out any scientific journal which dares to publish their critics’ work. It seems they are prepared to stop at nothing to stifle scientific debate in this way, not least by ensuring that no dissenting research should find its way into the pages of IPCC reports.
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And the London Times reports that the original data is gone:
Scientists at the University of East Anglia (UEA) have admitted throwing away much of the raw temperature data on which their predictions of global warming are based.
It means that other academics are not able to check basic calculations said to show a long-term rise in temperature over the past 150 years.
The UEA’s Climatic Research Unit (CRU) was forced to reveal the loss following requests for the data under Freedom of Information legislation.
The data were gathered from weather stations around the world and then adjusted to take account of variables in the way they were collected. The revised figures were kept, but the originals — stored on paper and magnetic tape — were dumped to save space when the CRU moved to a new building.
The admission follows the leaking of a thousand private emails sent and received by Professor Phil Jones, the CRU’s director. In them he discusses thwarting climate sceptics seeking access to such data.
In a statement on its website, the CRU said: “We do not hold the original raw data but only the value-added (quality controlled and homogenised) data.â€
The CRU is the world’s leading centre for reconstructing past climate and temperatures. Climate change sceptics have long been keen to examine exactly how its data were compiled. That is now impossible.
Roger Pielke, professor of environmental studies at Colorado University, discovered data had been lost when he asked for original records. “The CRU is basically saying, ‘Trust us’. So much for settling questions and resolving debates with science.â€
22 Nov 2009


And this is how we present the data, by taking care to stop at just the right point! (From Bishop Hill)
The University of East Anglia Climate Research Unit used to describe itself as “widely recognised as one of the world’s leading institutions concerned with the study of natural and anthropogenic climate change.”
After a Russian web-site offered a collection of stolen emails revealing conversations expressing doubts about Anthropogenic Global Warming, frustration at the inability of current models to predict actual climate, discussions of how to manipulate counter-evidence, and even fantasies about beating up scientific opponents, it is probably in the future going to recognized as a questionable, highly partisan source of suspect information, requiring the most careful independent review and confirmation.
The story is complicated, and the response from the left, which is invested in theories of Anthropogenic Global Warming (AGW) because they justify its preferred statist agenda and support its Manichaean hostility toward human productivity and prosperity, has been voluminous.
I do feel obliged to supply a basic tour d’horison of the affair.
Who leaked the emails? here (IMPORTANT: contains links to compressed copies of files since deleted from original Russian source.)
Andrew Bolt does the best job of summarizing the original story.
James Delingpole, at the Telegraph, collects a number of the best damning quotations from the leaked emails:
Manipulation of evidence:
I’ve just completed Mike’s Nature trick of adding in the real temps to each series for the last 20 years (ie from 1981 onwards) amd from 1961 for Keith’s to hide the decline.
Private doubts about whether the world really is heating up:
The fact is that we can’t account for the lack of warming at the moment and it is a travesty that we can’t. The CERES data published in the August BAMS 09 supplement on 2008 shows there should be even more warming: but the data are surely wrong. Our observing system is inadequate.
Suppression of evidence:
Can you delete any emails you may have had with Keith re AR4?
Keith will do likewise. He’s not in at the moment – minor family crisis.
Can you also email Gene and get him to do the same? I don’t have his new email address.
We will be getting Caspar to do likewise.
….
Attempts to disguise the inconvenient truth of the Medieval Warm Period (MWP):
……Phil and I have recently submitted a paper using about a dozen NH records that fit this category, and many of which are available nearly 2K back–I think that trying to adopt a timeframe of 2K, rather than the usual 1K, addresses a good earlier point that Peck made w/ regard to the memo, that it would be nice to try to “contain†the putative “MWPâ€, even if we don’t yet have a hemispheric mean reconstruction available that far back….
And, perhaps most reprehensibly, a long series of communications discussing how best to squeeze dissenting scientists out of the peer review process. How, in other words, to create a scientific climate in which anyone who disagrees with AGW can be written off as a crank, whose views do not have a scrap of authority.
“This was the danger of always criticising the skeptics for not publishing in the “peer-reviewed literatureâ€. Obviously, they found a solution to that–take over a journal! So what do we do about this? I think we have to stop considering “Climate Research†as a legitimate peer-reviewed journal. Perhaps we should encourage our colleagues in the climate research community to no longer submit to, or cite papers in, this journal. We would also need to consider what we tell or request of our more reasonable colleagues who currently sit on the editorial board…What do others think?â€
“I will be emailing the journal to tell them I’m having nothing more to do with it until they rid themselves of this troublesome editor.â€â€œIt results from this journal having a number of editors. The responsible one for this is a well-known skeptic in NZ. He has let a few papers through by Michaels and Gray in the past. I’ve had words with Hans von Storch about this, but got nowhere. Another thing to discuss in Nice !â€
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So how do you spin your way out of this one, a situation in which scientists are revealed to be conspiring to manipulate and supress evidence, in which they admit privately that their science does not work, in which they conspire to control scientific publication?
Brian Angliss knows how. You just pooh pooh the whole thing, and claim
(I)t’s much ado about nothing (with apologies to Shakespeare). I work in electrical engineering where I use words and phrases that, taken out of context, could be misinterpreted as nefarious by people who are ignorant of the context or who have an axe to grind.
It’s going to take the commentariat time to read and absorb 172 megabytes of material. I expect that there will be more to say about this.
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UPDATE:
More choice excerpts from Bishop Hill.
18 Nov 2009


Al Gore received the Nobel Peace Prize in 2007 for giving mankind scientific advice about the earth’s climate, but how good a scientific authority is he really?
Here he is a few days ago talking with Conan O’Brian about geothermal energy.
1:24 video
Quote the Goracle:
“two kilometers or so down in most places there are these incredibly hot rocks, ’cause the interior of the earth is extremely hot, several million degrees”
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John Derbyshire (who majored in mathematics at University College, London) corrects the Nobel laureate.
The geothermal gradient is usually quoted as 25–50 degrees Celsius per mile of depth in normal terrain (not, e.g., in the crater of Kilauea). Two kilometers down, therefore, (that’s a mile and a quarter if you’re not as science-y as Al) you’ll have an average gain of 30–60 degrees — exploitable for things like home heating, though not hot enough to make a nice pot of tea. The temperature at the earth’s core, 4,000 miles down, is usually quoted as 5,000 degrees Celsius, though these guys claim it’s much less, while some contrarian geophysicists have posted claims up to 9,000 degrees. The temperature at the surface of the Sun is around 6,000 degrees Celsius, while at the center, where nuclear fusion is going on bigtime, things get up over 10 million degrees.
If the temperature anywhere inside the earth was “several million degrees,” we’d be a star.
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Of course, there is no real reason for surprise. The Washington Post once looked up Albert Gore’s Harvard record, and reported:
For all of Gore’s later fascination with science and technology, he often struggled academically in those subjects. The political champion of the natural world received that sophomore D in Natural Sciences 6 (Man’s Place in Nature) and then got a C-plus in Natural Sciences 118 his senior year. The self-proclaimed inventor of the Internet avoided all courses in mathematics and logic throughout college, despite his outstanding score on the math portion of the SAT (730). As was the case with many of his classmates, his high school math grades had dropped from A’s to C’s as he advanced from trigonometry to calculus in his senior year.
When John C. Davis, a retired teacher and assistant headmaster at St. Albans, was recently shown his illustrious former pupil’s college board achievement test scores, he inspected them closely with a magnifier and shook his head, chuckling quietly at the science results.
“Four eighty-eight! Terrible” Davis declared upon inspecting the future vice president’s 488 score (out of a possible 800) in physics.
“Hmmmm. Chemistry. Five-nineteen. He didn’t do too well in chemistry.”
16 Nov 2009

Are you a genetically a dandelion or an orchid? Both have their place in the evolutionary scheme of things according to a recent article in the Atlantic by David Dobbs.
Most of us have genes that make us as hardy as dandelions: able to take root and survive almost anywhere. A few of us, however, are more like the orchid: fragile and fickle, but capable of blooming spectacularly if given greenhouse care. So holds a provocative new theory of genetics, which asserts that the very genes that give us the most trouble as a species, causing behaviors that are self-destructive and antisocial, also underlie humankind’s phenomenal adaptability and evolutionary success. With a bad environment and poor parenting, orchid children can end up depressed, drug-addicted, or in jail—but with the right environment and good parenting, they can grow up to be society’s most creative, successful, and happy people.
Hat tip to Bird Dog.
18 Oct 2009


Leonardo da Vinci, Portrait of Young Girl in Profile
The London Time describes how sophisticated forensic techniques were able to authenticate a portrait profile drawing in inks and chalks as the work of Leonardo da Vinci.
The 33 x 23cm (13 x 9in) picture, in chalk, pen and ink, appeared at auction at Christie’s, New York, in 1998, catalogued as “German school, early 19th centuryâ€. It sold for $19,000 (£11,400). Now a growing number of leading art experts agree that it is almost certainly by Leonardo da Vinci and worth about £100 million.
Carbon dating and infra-red analysis of the artist’s technique are consistent with such a conclusion, but the most compelling evidence is that fragment of a fingerprint.
Peter Paul Biro, a Montreal-based forensic art expert, found it while examining images captured by the revolutionary multispectral camera from the Lumière Technology company. …
The fingerprint corresponds to the tip of the index or middle finger, and is “highly comparable†to one on Leonardo’s St Jerome in the Vatican. Importantly, St Jerome is an early work from a time when Leonardo was not known to have employed assistants, making it likely that it is his fingerprint.
Martin Kemp, Emeritus Professor of History of Art at the University of Oxford, is convinced and recently completed a book about the find (as yet unpublished). He said that his first reaction was that “it sounded too good to be true — after 40 years in the business, I thought I’d seen it allâ€. But gradually, “all the bits fell into place.â€
Professor Kemp has rechristened the picture, sold as Young Girl in Profile in Renaissance Dress, as La Bella Principessa after identifying her, “by a process of eliminationâ€, as Bianca Sforza, daughter of Ludovico Sforza, Duke of Milan (1452-1508), and his mistress Bernardina de Corradis. He described the profile as “subtle to an inexpressible degreeâ€, as befits the artist best known for the Mona Lisa.
If it is by Leonardo, it would be the only known work by the artist on vellum although Professor Kemp points out that Leonardo asked the French court painter Jean Perréal about the technique of using coloured chalks on vellum in 1494.
The picture was bought in 1998 by Kate Ganz, a New York dealer, who sold it for about the same sum to the Canadian-born Europe-based connoisseur Peter Silverman in 2007. Ms Ganz had suggested that the portrait “may have been made by a German artist studying in Italy … based on paintings by Leonardo da Vinciâ€. …
Carbon-14 analysis of the vellum gave a date range of 1440-1650. Infra-red analysis revealed stylistic parallels to Leonardo’s other works, including a palm print in the chalk on the sitter’s neck “consistent … to Leonardo’s use of his hands in creating texture and shadingâ€, according to Mr Biro.
08 Oct 2009


“Cerca Trova†(Seek and Find) appears on a banner on Vasari’s mural of the Battle of Marciano
Only 15 surviving paintings are generally attributed in whole or in part to Leonardo. His responsibility for another six is disputed.
Dr. Maurizio Seracini, an engineering professor from UC San Diego, had been pursuing a quest to recover Leonardo Da Vinci’s largest painting, a 1505 fresco depiction of the 65 year earlier Battle of Angiarhi between Florence and Milan which once ornamented the Hall of Five Hundred in Florence, which disappeared in the course of a mid-16th century remodeling by Giogio Vasari, for a number of years.
The New York Times reports that scientific instruments are now ready to test Seracini’s hypothesis that Vasari simply walled-up the Da Vinci fresco.
“The Battle of Anghiari,†(was) the largest painting Leonardo ever undertook (three times the width of “The Last Supperâ€). Although it was never completed — Leonardo abandoned it in 1506 — he left a central scene of clashing soldiers and horses that was hailed as an unprecedented study of anatomy and motion. For decades, artists like Raphael went to the Hall of 500 to see it and make their own copies.
Then it vanished. During the remodeling of the hall in 1563, the architect and painter Giorgio Vasari covered the walls with frescoes of military victories by the Medicis, who had returned to power. Leonardo’s painting was largely forgotten.
But in 1975, when Dr. Seracini studied one of Vasari’s battle scenes, he noticed a tiny flag with two words, “Cerca Trovaâ€: essentially, seek and ye shall find. Was this Vasari’s signal that something was hidden underneath? …
(N)ew analysis showed that the spot painted by Leonardo was right at the “Cerca Trova†clue. The even better news, obtained from radar scanning, was that Vasari had not plastered his work directly on top of Leonardo’s. He had erected new brick walls to hold his murals, and had gone to special trouble to leave a small air gap behind one section of the bricks — the section in back of “Cerca Trova.†…
Dr. Seracini was stymied until 2005, when he appealed for help at a scientific conference and got a suggestion to send beams of neutrons harmlessly through the fresco. With help from physicists in the United States, Italy’s nuclear-energy agency and universities in the Netherlands and Russia, Dr. Seracini developed devices for identifying the telltale chemicals used by Leonardo.
One device can detect the neutrons that bounce back after colliding with hydrogen atoms, which abound in the organic materials (like linseed oil and resin) employed by Leonardo. Instead of using water-based paint for a traditional fresco in wet plaster like Vasari’s, Leonardo covered the wall with a waterproof ground layer and used oil-based paints.
The other device can detect the distinctive gamma rays produced by collisions of neutrons with the atoms of different chemical elements. The goal is to locate the sulfur in Leonardo’s ground layer, the tin in the white prime layer and the chemicals in the color pigments, like the mercury in vermilion and the copper in blue pigments of azurite. …
Once he gets permission, Dr. Seracini said, he hopes to complete the analysis within about a year. If “The Battle of Anghiari†is proved to be there, he said, it would be feasible for Florentine authorities to bring in experts to remove the exterior fresco by Vasari, extract the Leonardo painting and then replace the Vasari fresco. Of course, no one knows what kind of shape the painting might be in today. But Dr. Seracini, who has extensively analyzed the damages suffered by many Renaissance paintings, said that he was optimistic about “The Battle of Anghiari.â€
“The advantage is that it has been covered up for five centuries,†he said. “It’s been protected against the environment and vandalism and bad restorations. I don’t expect there to be much decay.â€
If he is right, then perhaps Vasari did Leonardo a favor by covering up the painting — and taking care to leave that cryptic little flag above the trove.

Rubens chalk, ink, and water-color copy of Da Vinci study for “The Battle of Anghiari,†Musée du Louvre
24 Sep 2009
Rick Trebino of Georgia Tech seems a little frustrated by the process.
Hat tip to William Laffer.
16 Jul 2009

ScienceFair reads a new journal article in Nature Geoscience and begins to wonder.
Could the best climate models — the ones used to predict global warming — all be wrong?
Maybe so, says a new study published online today in the journal Nature Geoscience. The report found that only about half of the warming that occurred during a natural climate change 55 million years ago can be explained by excess carbon dioxide in the atmosphere. What caused the remainder of the warming is a mystery.
“In a nutshell, theoretical models cannot explain what we observe in the geological record,” says oceanographer Gerald Dickens, study co-author and professor of Earth Science at Rice University in Houston. “There appears to be something fundamentally wrong with the way temperature and carbon are linked in climate models.”
During the warming period, known as the “Palaeocene-Eocene thermal maximum†(PETM), for unknown reasons, the amount of carbon in Earth’s atmosphere rose rapidly. This makes the PETM one of the best ancient climate analogues for present-day Earth.
As the levels of carbon increased, global surface temperatures also rose dramatically during the PETM. Average temperatures worldwide rose by around 13 degrees in the relatively short geological span of about 10,000 years.
The conclusion, Dickens said, is that something other than carbon dioxide caused much of this ancient warming. “Some feedback loop or other processes that aren’t accounted for in these models — the same ones used by the Intergovernmental Panel on Climate Change for current best estimates of 21st century warming — caused a substantial portion of the warming that occurred during the PETM.”
Abstract:
The Palaeocene–Eocene Thermal Maximum (about 55 Myr ago) represents a possible analogue for the future and thus may provide insight into climate system sensitivity and feedbacks. The key feature of this event is the release of a large mass of 13C-depleted carbon into the carbon reservoirs at the Earth’s surface, although the source remains an open issue. Concurrently, global surface temperatures rose by 5–9 °C within a few thousand years. Here we use published palaeorecords of deep-sea carbonate dissolution, and stable carbon isotope composition, along with a carbon cycle model to constrain the initial carbon pulse to a magnitude of 3,000 Pg C or less, with an isotopic composition lighter than minus50permil. As a result, atmospheric carbon dioxide concentrations increased during the main event by less than about 70% compared with pre-event levels. At accepted values for the climate sensitivity to a doubling of the atmospheric CO2 concentration1, this rise in CO2 can explain only between 1 and 3.5 °C of the warming inferred from proxy records. We conclude that in addition to direct CO2 forcing, other processes and/or feedbacks that are hitherto unknown must have caused a substantial portion of the warming during the Palaeocene–Eocene Thermal Maximum. Once these processes have been identified, their potential effect on future climate change needs to be taken into account.
29 Mar 2009

Dr. Mason Williams, retired Professor Emeritus from the University of Rhode Island, College of Engineering, has written up a succinct summary of the basic issues underlying the debate on Anthropogenic Global Warming.
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